Crystaldiffract demo12/29/2023 ![]() ![]() A bug that caused PDB remark data that was more than 72 characters long to be clipped from the refined output has been fixed. This version corrects a serious error in which WRITEDICT wrote incorrect bonds lengths for 5-5, 5-6 heterocycle ring systems. The output dictionaries enforce, as closely as possible, the input ligand’s geometries while allowing the refinement programs to modify the geometry as needed. Coot 0.6 and earlier versions are no longer supported.įLYNN (the ligand fitting application) comes bundled with a refinement dictionary writer, WRITEDICT, that uses the MMFF94 force field to derive geometrical constraints for input ligands or protein-ligand complexes. OSX 10.7, OSX 10.8, OSX 10.9, SuSe 11, and Redhat 5 x86 are no longer supported Support has been added for Ubuntu 16, OSX 10.10, OSX 10.11, and OSX 10.12. AFITT merges OpenEye’s Shape and MMFF technologies into a new combined forcefield that fits small molecules into crystallographic density while maintaining excellent chemistry. Update 047 is out and contains updates to: ComponentĪdd 0WD,2Q5,6G6,6ZL,79F,7K9,8LL, 9Q8,FJI,OMZ,QUJ,QVE,RU2,YY9įixes bug which causes MG/MrBUMP to not work for many sequencesįalse "duplicate sequence number" error in case of short residue namesĪFITT is a crystallographic tool for correctly placing small molecules in real-space density. Take advantage of our unique "Depth Profiling" tool, to rapidly scan ares of interest in massive structures - ideal for characterizing the results from computer models.ĬCP4 exists to produce and support a world-leading, integrated suite of programs that allows researchers to determine macromolecular structures by X-ray crystallography, and other biophysical techniques. CrystalMaker X can also handle truly massive structures. CrystalMaker can handle including multi-structure files such as DL_POLY HISTORY - use CrystalMaker's synchronization and animation capabilities to rapidly understand structural behaviour, lattice dynamics, or visualize the trajectory of a simulation. They also have a set of video tutorials available.ĬrystalMaker X lets you import data from over 40 different formats: with instant display and powerful customization. More details are available from the download page Advanced control over axial vectors with scaling, fonts, positioning, inset etc.Fat sticks display option (great for emphasising structural channels).Powerful video sizing/compression options.Spring-loaded sidebars: move the mouse to the edge of the screen to show the relevant sidebar (works great in full-screen mode).Customizable Atoms Inspector and coordinates display. ![]() Interpolate Structures command - makes animating structural behaviour smooth and seamless.Live powder diffraction: link CrystalMaker 10.4 with CrystalDiffract 6.8 so that editing a crystal in CrystalMaker automatically updates its simulated powder diffraction pattern in CrystalDiffract.New energy-modelling engine: makes designing your own molecules quick and easy, with vibrational spectra simulation.Sleek new structures library with integrated CrystalViewer (1,100 structures fully customizable).Code-signed, sandboxed, with “hardened runtime” for maximum securityĬrystalMaker 10.4 has over 60 new features, of which the most-important are probably:.They’re not Windows or Unix applications reskinned via Qt, Java, wxWidgets they’re the real deal: 100% pure Mac. The much-awaited CrystalMaker 10.4 is now shipping - complete with full “Dark Mode”.ĬrystalMaker and CrystalDiffract are real 64-bit Mac programs, written in Cocoa/Objective-C, with beautiful real Mac interfaces. More details on scientific applications under Big Sur are here We expect that these final remaining issues will be addressed in the next CSD software release. The Aromatics Analyser component in the CSD-Materials menu of Mercury does not work on M1 Apple silicon based macs.The POV-Ray integration in Mercury for high-resolution graphics generation does not work on M1 Apple silicon based macs.At this point we are aware of just two specific known issues for the newer silicon hardware machines: We are pleased to report that the newly available 2020.3.1 CSD Release (only available on macOS) is fully supported on macOS Big Sur at point of release, both for Intel-based macs, as well as the newer M1 Apple silicon based macs. The full CSD software portfolio, including Mercury, ConQuest, Mogul, GOLD, CSD-CrossMiner, the CSD Python API and other components, has now been upgraded and tested for compatibility with Big Sur.
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